SBEToolbox: A Matlab Toolbox for Biological Network Analysis

SBEToolbox: A Matlab Toolbox for Biological Network Analysis

We present SBEToolbox (Systems Biology and Evolution Toolbox), an open-source Matlab toolbox for biological network analysis. It takes a network file as input, calculates a variety of centralities and topological metrics, clusters nodes into modules, and displays the network using different graph layout algorithms. Straightforward implementation and the inclusion of high-level functions allow t...

Cluster Analysis: A Toolbox for MATLAB

A broad definition of clustering can be given as the search for homogeneous groupings of objects based on some type of available data. There are two common such tasks now discussed in (almost) all multivariate analysis texts and implemented in the commercially available behavioral and social science statistical software suites: hierarchical clustering and the K-means partitioning of some set of...

Digital filter analysis toolbox for MATLAB

A matlab toolbox has been developed that analyzes digital lter structures. After describing the digital lter structure in a SPICE-like format, the programs of this toolbox can map a digital lter structure into a state-space description, convert a state-space description to a z-domain transfer function, compute the maximum signal magnitude when input is bounded by unity, compute noise power at t...

LYNGBY Matlab toolbox for functional neuroimaging analysis

Automated Microarray Image Analysis Toolbox for MATLAB

UNLABELLED The Automated Microarray Image Analysis (AMIA) Toolbox for MATLAB is a flexible, open-source, microarray image analysis tool that allows the user to customize analyses of microarray image sets. This tool provides several methods to identify and quantify spot statistics, as well as extensive diagnostic statistics and images to evaluate data quality and array processing. The open, modu...